Indlela yokuvula, ukuhlela, nokuguqula iifayile ze-PDB
Ifayili enefayile yePDB isandelwa kakhulu kwifayile efakwe kwifom yeData yeDatha eSebenzisiweyo ekusebenziseni ukulungisa ingcaciso ngeprogram okanye imodyuli, njengefayile yeDLL okanye i- EXE . Ngamanye amaxesha kuthiwa iifayile zefayile.
Iifayile ze-PDB zibala iimpawu ezahlukahlukeneyo kunye nezitatimenti kwikhowudi yomthombo kwimveliso yayo yokugqibela ehlanganisiweyo, leyo i-debugger ingayisebenzisa ukuyifumana ifayile yomthombo kunye nendawo ekuqhutyelwa kuyo ekufuneka imise inkqubo yokulungisa.
Ezinye iifayile ze-PDB zinokuthi zibe kwifom yefayile yeProtein Data Bank. Ezi fayile ze-PDB ziifayile ezicacileyo ezigcinwe zigcina izilungelelaniso malunga nezakhiwo zeprotheni.
Amanye amafayile e-PDB mhlawumbi adalwe kwi-Palm Database okanye ifomathi yefayile yePalmDOC kwaye isetyenziswe kwindlela yokusebenza yeselula ye- PalmOS . Ezinye iifayile kule fomethi zisebenzisa isandiso sefayile yePRPR.
Indlela yokuvula ifayile yePDB
Iinkqubo ezahlukeneyo zisebenzisa iifayile zePDB ukugcina idatha ngolunye uhlobo lwefomathi yolwazi oluhlelekile, ngoko ke isicelo ngasinye sisetyenziselwa ukuvula uhlobo lwalo lwefayile yePDB. I-Geneious, i-Intuit Quicken, iMicrosoft Visual Studio, kunye ne-Pegasus yimizekelo embalwa yeenkqubo ezingasebenzisa ifayile yePDB njengefayile yeenkcukacha. Radare kunye nePDBparse bangasebenzela ukuvula iiFDB neefayile.
Amanye amafayile e-PDB agcinwa njengombhalo ocacileyo, njengeefayile zeDevelopment Debug zeFayile, kwaye zifundwa ngabantu ngokupheleleyo xa zivuliwe kumhleli wombhalo. Unokuvula olu hlobo lwefayili yePDB kunye nayiphi na inkqubo enokufunda amaxwebhu obhaliweyo, njengenkqubo yokwenza i-Notepad kwiWindows. Ezinye izibukeli zefayile zePDB kunye nabahleli ziquka i-Notepad ++ neeBhakethi.
Ezinye iifayile zeenkcukacha ze-PDB azikho imibhalo yombhalo kwaye ziyiluncedo kuphela xa zivuliwe kunye nenkqubo ejoliswe kuyo. Umzekelo, ukuba ifayili yakho yePDB idibene ngandlela-thile yoKhusela, uze uzame ukuyisebenzisa loo software ukujonga okanye ukuhlela ifayile yePDB. I-Visual Studio ilindele ukujonga ifayile yePDB kwifolda efanayo nefayile ye-DLL okanye i-EXE.
Ungajonga kwaye uhlele iiFDB iiFayile zeProtein Data Bank, kwi-Windows, Linux, kunye ne-MacOS kunye ne-Avogadro. I-Jmol, i-RasMol, i-QuickPDB kunye ne-USCF i-Chimera inokuvula ifayile ye-PDB. Ekubeni ezi fayile zibhalwe ngokucacileyo, unokuvula ifayile yePDB kumhleli wesicatshulwa.
Ideskithophu yePalm kufuneka ikwazi ukuvula iiFDB kwifayile eFomathi yeFayile yeFayile yeDeskithophu kodwa kufuneka uqale uyiqambe kwakhona ukuba ube ne-.PRC ifowuni yokongezwa yolu hlelo ukuyiqonda. Ukuvula ifayile yePDDOC yePDB, zama i-STDU Viewer.
Indlela yokuguqula ifayile yePDB
Iifayile zeData yeDatabase zingenakho ukuguqulwa kwifayile yeefayile ezahlukeneyo, ubuncinane ngekhompyutha yexesha eliguqukayo . Endaweni yoko, ukuba kukho naluphi na isilungiso esinokuguqula olu hlobo lwefayili yePDB, kuya kuba yinto efanayo yokuyivula.
Umzekelo, ukuba ufuna ukuguqula ifayile yakho yedatha ye-PDB kwi-Quicken, zama ukusebenzisa le nkqubo ukwenza. Olu hlobo lokuguqulwa, nangona kunjalo, mhlawumbi alusebenzi nje kuphela kodwa aluxhaswanga kwezi zicelo zesiseko sedatha (oko kukuthi mhlawumbi akudingeki ukuguqula olu hlobo lwefayili yePDB nakwezinye iifomati).
Iifayile zeProtein Data Bank zingaguqukela kwezinye iifom nge MeshLab. Ukwenza oku, kufuneka uqale ukuguqula ifayile ye-PDB kwi-WRL kunye ne-PyMOL kwiFayile> Gcina umfanekiso njenge> Imenyu ye- VRML , kwaye ungenise ifayile yeWRL kwi-MeshLab uze usebenzise iFayile> Ukuthumela ii-Mesh njengemenyu ekugqibeleni ukuguqula i-PDB ifayile kwi-STL okanye enye ifayile yefayile.
Ukuba awuyidingi imodeli ukuba ibe ngumbala, ungathumela ifayile yePDB ngqo kwi-STL kunye ne-USCF Chimera (iqhosha lokukhuphela liphezulu). Ngaphandle koko, ungasebenzisa indlela efanayo nangaphezulu (nge-MeshLab) ukuguqula i-PDB kwi-WRL nge-USCF Chimera uze uthumele iFayile ye-WRL kwi-STL nge-MeshLab.
Ukuguqula i-PDB kwi- PDF okanye i- EPUB , ukuba unayo ifayile yePalmDOC, inokwenzeka ngeendlela ezininzi kodwa kulula kakhulu ukusebenzisa umguquleli we-PDB kwi-intanethi njenge- Zamzar . Unako ukulayisha ifayile yakho yePDB kwiwebhusayithi ukuze ukhethe ukuguqula loo maxwebhu kunye ne-AZW3, i-FB2, i-MOBI, i-PML, i-PRC, i-TXT kunye nezinye iifom zefayile ze-eBook.
Ukuguqula ifayile yePDB kwifomati yeFASTA inokwenziwa nge-PDA ye-Meiler Lab kwi-intanethi kwi-FASTA.
Kwakhona kunokwenzeka ukuguqula i-PDB kwiCIF (i-Crystallographic Information format) kwi-intanethi usebenzisa i-PDBx / mmCIF.
UkuFunda okuPhambili kwiifayile zePDB
Unokufunda okuninzi malunga neefayile zeDatha yeDatha kwiMicrosoft, GitHub, kunye neWintellect.
Kukho okungakumbi ukufunda ngeefayile zeProtein Data Bank kwakhona; ubona i-Worldwide Protein Data Bank kunye ne-RCSB PDB.
Ngaba Ifayile Yakho Ayisayi kuvulwa?
Iifayile ze-PDB ezingavuli naziphi na izixhobo ezivela ngasentla, mhlawumbi azikho iifayile ze-PDB. Yintoni eyenzekayo kukuba ungaphambuki i-extension extension file; ezinye iifom zefayile zisebenzisa isisombululo esifana ngokugqithiseleyo ".PDB" xa bengabandakanyekanga kwaye asebenzisanga okufanayo.
Umzekelo, ifayili yeFayile yifayile yexwebhu kodwa ezininzi iinkqubo ezivela ngasentla aziyi kunika umbhalo kunye / okanye imifanekiso ngokuchanekileyo xa uzama ukuvula enye nale nkqubo yeprogram. Kuyafana nezinye iifayile ezinezifayile zefayile ezifana neefayile, njenge PD, PDE, PDC, kunye neefowuni ze-PDO.
I-PBD enye enye yeprogram ye - EaseUS Todo Backup kwaye iyanceda kuphela xa ivuliwe kunye nesoftware.
Ukuba awunayo ifayile yePDB, phangela uphando lwefayile efayile yakho ukuze ukwazi ukufumana inkqubo efanelekileyo evula okanye eguqula.